Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Huta_1274 | Huta_1275 | Huta_1274 | Huta_1275 | KEGG: hma:rrnAC3287 hypothetical protein. | PFAM: regulatory protein AsnC/Lrp family; KEGG: hma:rrnAC3288 hypothetical protein. | 0.542 |
Huta_1274 | radA | Huta_1274 | Huta_1273 | KEGG: hma:rrnAC3287 hypothetical protein. | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.485 |
Huta_1275 | Huta_1274 | Huta_1275 | Huta_1274 | PFAM: regulatory protein AsnC/Lrp family; KEGG: hma:rrnAC3288 hypothetical protein. | KEGG: hma:rrnAC3287 hypothetical protein. | 0.542 |
radA | Huta_1274 | Huta_1273 | Huta_1274 | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | KEGG: hma:rrnAC3287 hypothetical protein. | 0.485 |