node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Huta_0308 | Huta_1416 | Huta_0308 | Huta_1416 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | 0.887 |
Huta_0308 | Huta_2465 | Huta_0308 | Huta_2465 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC0680 helicase. | 0.887 |
Huta_0308 | Huta_2521 | Huta_0308 | Huta_2521 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | PFAM: RNA polymerase insert; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type; KEGG: hma:rrnAC0062 DNA-directed RNA polymerase subunit D. | 0.993 |
Huta_0308 | pcn | Huta_0308 | Huta_1648 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | Proliferating cell nuclear antigen, PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.430 |
Huta_0308 | rpoH | Huta_0308 | Huta_0785 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | RNA polymerase Rpb5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.998 |
Huta_0308 | rpoK | Huta_0308 | Huta_2516 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | RNA polymerase Rpb6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.991 |
Huta_0308 | rpoN | Huta_0308 | Huta_2517 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | RNA polymerase, N/8 Kd subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.989 |
Huta_0308 | rpoP | Huta_0308 | Huta_2673 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | RNA polymerase Rbp10; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.989 |
Huta_0308 | tfe | Huta_0308 | Huta_0285 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] | 0.999 |
Huta_0308 | uvrC | Huta_0308 | Huta_2640 | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.887 |
Huta_1416 | Huta_0308 | Huta_1416 | Huta_0308 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: hma:rrnAC0617 DNA repair protein Rad25. | 0.887 |
Huta_1416 | Huta_2465 | Huta_1416 | Huta_2465 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC0680 helicase. | 0.921 |
Huta_1416 | Huta_2521 | Huta_1416 | Huta_2521 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | PFAM: RNA polymerase insert; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type; KEGG: hma:rrnAC0062 DNA-directed RNA polymerase subunit D. | 0.877 |
Huta_1416 | pcn | Huta_1416 | Huta_1648 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | Proliferating cell nuclear antigen, PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.686 |
Huta_1416 | rpoH | Huta_1416 | Huta_0785 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | RNA polymerase Rpb5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.835 |
Huta_1416 | rpoK | Huta_1416 | Huta_2516 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | RNA polymerase Rpb6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.834 |
Huta_1416 | rpoN | Huta_1416 | Huta_2517 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | RNA polymerase, N/8 Kd subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.834 |
Huta_1416 | rpoP | Huta_1416 | Huta_2673 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | RNA polymerase Rbp10; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.834 |
Huta_1416 | tfe | Huta_1416 | Huta_0285 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | Transcription factor TFIIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongatio [...] | 0.873 |
Huta_1416 | uvrC | Huta_1416 | Huta_2640 | PFAM: DEAD_2 domain protein; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC2719 helicase. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.691 |