STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_1469TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: hma:rrnAC0556 sn-glycerol-3-phosphate dehydrogenase subunit C. (459 aa)    
Predicted Functional Partners:
Huta_1471
TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: hma:rrnAC0554 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 
 0.999
Huta_1470
KEGG: hsl:OE3764F glycerol-3-phosphate dehydrogenase subunit B; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase.
 
 
 0.996
Huta_0361
PFAM: protein of unknown function DUF162; KEGG: hsl:OE6062R hypothetical protein.
 
 
 0.938
Huta_0683
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cno:NT01CX_0612 glycerol-3-phosphate dehydrogenase.
  
 
  0.910
egsA
3-dehydroquinate synthase; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
     
  0.900
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
 
 0.855
Huta_0331
PFAM: L-lactate permease; KEGG: hsl:OE6063F putative L-lactate permease.
 
  
 0.790
Huta_2438
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: hma:rrnAC2334 putative oxidoreductase.
 
  
0.768
Huta_2833
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: hsl:OE2866R succinate dehydrogenase subunit B (iron-sulfur protein).
   
 0.657
Huta_1410
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: hsl:OE6185F cytochrome d ubiquinol oxidase subunit I.
 
  
 0.628
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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