STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_2139PFAM: glycosyl transferase group 1; KEGG: mae:Maeo_0394 glycosyl transferase group 1. (357 aa)    
Predicted Functional Partners:
Huta_2138
PFAM: glycosyl transferase family 2; KEGG: tpd:Teth39_1630 glycosyl transferase family protein.
  
 0.877
Huta_2136
PFAM: glycosyl transferase group 1; KEGG: mth:MTH335 galactosyl-transferase RfpB related protein.
 
     0.725
Huta_2137
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: nph:NP1944A transport protein 57 (polysaccharide biosynthesis transport protein).
  
    0.619
Huta_0539
PFAM: glycosyl transferase group 1; KEGG: hwa:HQ2691A hexosyltransferase; glycosyltransferase.
 
     0.571
Huta_1141
Nucleotide sugar dehydrogenase; KEGG: hma:rrnAC3239 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol- 3-phosphate dehydrogenase domain protein.
 
  
 0.557
Huta_2142
KEGG: mem:Memar_0185 dTDP-4-dehydrorhamnose 3,5- epimerase.
 
  
 0.539
Huta_0995
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: hsl:OE1018F sugar transferase.
 
  
 0.517
Huta_0088
PFAM: glycosyl transferase group 1; KEGG: hma:rrnAC1352 glycosyltransferase.
  
     0.469
Huta_1126
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4438 glycosyl transferase, group 1.
  
     0.461
Huta_2143
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: mst:Msp_1102 dTDP-glucose pyrophosphorylase.
 
  
 0.458
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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