STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_2226PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: ppd:Ppro_3523 respiratory-chain NADH dehydrogenase, subunit 1. (328 aa)    
Predicted Functional Partners:
Huta_0704
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: hma:rrnAC1449 NADH dehydrogenase/oxidoreductase.
 
 0.999
Huta_2344
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: hma:rrnAC2023 NADH dehydrogenase I chain C D.
 
 0.999
Huta_0692
KEGG: hma:rrnAC1458 NADH dehydrogenase/oxidoreductase; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
 0.996
Huta_0693
KEGG: nph:NP2312A NADH dehydrogenase-like complex, subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
 0.996
Huta_0705
KEGG: hsl:OE1954F NADH dehydrogenase-like complex subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 0.996
Huta_0706
PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: nph:NP2292A NADH dehydrogenase-like complex, subunit A.
 
 0.995
Huta_2225
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ppd:Ppro_3522 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 0.991
Huta_0695
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: hsl:OE1963F NADH dehydrogenase-like complex subunit K.
 
 
 0.986
Huta_2098
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: pca:Pcar_1602 NADP-reducing hydrogenase chain A.
  
 0.986
Huta_2099
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_4108 NADH dehydrogenase (quinone).
  
 0.985
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.