STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_2278PFAM: CoA-binding domain protein; KEGG: hma:rrnAC0888 succinyl-CoA synthetase. (698 aa)    
Predicted Functional Partners:
Huta_2845
TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: sru:SRU_1684 acetyl-CoA synthase.
 
  
 0.981
Huta_0597
PFAM: Thiolase; KEGG: hwa:HQ2307A acetyl-CoA C-acyltransferase.
 
 
 0.957
Huta_0898
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: hma:rrnAC0719 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
    
 0.947
Huta_2847
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: hma:rrnAC1268 putative 2-ketoglutarate ferredoxin oxidoreductase (beta).
    
 0.947
Huta_2848
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: hma:rrnAC1267 2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.943
Huta_1481
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mtp:Mthe_1646 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 0.938
Huta_1479
KEGG: mbu:Mbur_2155 pyruvate ferredoxin oxidoreductase subunit gamma; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase.
    
 0.937
Huta_0897
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: nph:NP1232A oxoglutarate--ferredoxin oxidoreductase, alpha subunit.
  
 0.933
Huta_1480
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mka:MK0081 pyruvate:ferredoxin oxidoreductase, delta subunit.
    
 0.929
Huta_2279
PFAM: DRTGG domain protein; KEGG: hma:rrnAC0887 cobyrinic acid ac-diamide synthase.
 
   
 0.929
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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