STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_2390PFAM: Carbohydrate-binding family V/XII; PKD domain containing protein; protein of unknown function DUF303 acetylesterase putative; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein; KEGG: chu:CHU_1239 bifunctional acetylxylan esterase/xylanase, CBM4 module, glycoside hydrolase family 10 protein and carbohydrate esterase family 6 protein. (523 aa)    
Predicted Functional Partners:
Huta_1153
KEGG: bth:BT_3664 putative alpha-glucosidase.
 
     0.665
Huta_2391
PFAM: Fibronectin type III domain protein; glycoside hydrolase family 10; SMART: Fibronectin type III domain protein; glycoside hydrolase family 10; KEGG: sus:Acid_2816 glycoside hydrolase family protein.
 
     0.581
Huta_2389
KEGG: hypothetical protein.
       0.568
Huta_2387
PFAM: Fibronectin type III domain protein; glycoside hydrolase family 5; SMART: Fibronectin type III domain protein; KEGG: cja:CJA_3369 cellulase, putative, cel5C.
 
     0.537
Huta_0302
PFAM: glycoside hydrolase family 5; KEGG: sde:Sde_2494 hypothetical protein.
  
    0.488
Huta_2394
PFAM: Fibronectin type III domain protein; glycoside hydrolase family 5; SMART: Fibronectin type III domain protein; KEGG: cja:CJA_3369 cellulase, putative, cel5C.
 
  
 0.488
Huta_0219
KEGG: ote:Oter_0116 putative acetyl xylan esterase.
  
     0.471
Huta_2398
PFAM: Carbohydrate binding family 6; glycoside hydrolase family 5; Fibronectin type III domain protein; SMART: cellulose binding type IV; Fibronectin type III domain protein; KEGG: ote:Oter_3673 fibronectin type III domain- containing protein.
 
     0.459
Huta_2392
PFAM: Fibronectin type III domain protein; glycoside hydrolase family 10; PKD domain containing protein; SMART: Fibronectin type III domain protein; PKD domain containing protein; KEGG: sus:Acid_2816 glycoside hydrolase family protein.
 
    
0.447
Huta_2395
PFAM: glycoside hydrolase family 5; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: ote:Oter_3673 fibronectin type III domain- containing protein.
 
     0.444
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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