STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_2399PFAM: glycoside hydrolase family 9; Fibronectin type III domain protein; type 3a cellulose-binding domain protein; SMART: Fibronectin type III domain protein; KEGG: cth:Cthe_2360 glycoside hydrolase family protein. (984 aa)    
Predicted Functional Partners:
Huta_1363
PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: tma:TM1848 cellobiose-phosphorylase.
  
  
  0.932
Huta_1364
PFAM: glycosyltransferase 36; putative carbohydrate binding; glycosyltransferase 36 associated; KEGG: scl:sce6460 hypothetical protein.
  
  
  0.930
Huta_1163
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tpd:Teth39_2055 glycoside hydrolase family 3 protein.
  
  
  0.698
Huta_1370
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: tpd:Teth39_2055 glycoside hydrolase family 3 protein.
  
  
  0.698
Huta_0867
PFAM: glycoside hydrolase family 3 domain protein; KEGG: dth:DICTH_0696 xylosidase/arabinosidase.
  
  
  0.691
Huta_1047
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sal:Sala_1014 glycoside hydrolase family protein.
     
  0.650
Huta_2836
PFAM: glycoside hydrolase family 3 domain protein; KEGG: hma:rrnAC1113 beta-D-glucosidase.
     
  0.650
Huta_2398
PFAM: Carbohydrate binding family 6; glycoside hydrolase family 5; Fibronectin type III domain protein; SMART: cellulose binding type IV; Fibronectin type III domain protein; KEGG: ote:Oter_3673 fibronectin type III domain- containing protein.
 
    
0.587
Huta_0988
PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10; KEGG: sde:Sde_0323 TonB-like.
  
     0.513
Huta_1961
Endo-1,4-beta-xylanase; KEGG: tfu:Tfu_1213 xylanase; PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; PKD domain containing protein; SMART: cellulose binding type IV.
  
     0.506
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
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