STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Huta_2467PFAM: CinA domain protein; KEGG: hma:rrnAC0693 competence/damage-inducible protein CinA. (172 aa)    
Predicted Functional Partners:
Huta_0288
PFAM: molybdopterin binding domain; KEGG: nph:NP4100A CinA-like domain-containing protein.
   
 0.945
Huta_0977
PFAM: Quinolinate phosphoribosyl transferase; KEGG: hma:rrnAC2241 nicotinate phosphoribosyltransferase.
  
 
 0.938
Huta_1581
Nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
  
  
 0.933
Huta_2898
KEGG: hma:rrnAC1913 nicotinamide-nucleotide adenylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase.
    
 0.925
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.907
Huta_2468
PFAM: membrane-bound metal-dependent hydrolase; KEGG: hma:rrnAC0695 putative membrane-bound metal- dependent hydrolase.
       0.653
mre11
Metallophosphoesterase; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity; Belongs to the MRE11/RAD32 family.
       0.622
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
 
   
 0.603
Huta_2466
PFAM: aminoglycoside phosphotransferase; KEGG: hma:rrnAC0248 phosphotransferase.
       0.586
Huta_2465
SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicases; KEGG: hma:rrnAC0680 helicase.
 
    0.513
Your Current Organism:
Halorhabdus utahensis
NCBI taxonomy Id: 519442
Other names: H. utahensis DSM 12940, Halorhabdus utahensis AX-2, Halorhabdus utahensis DSM 12940, Halorhabdus utahensis str. DSM 12940, Halorhabdus utahensis strain DSM 12940
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.