STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR36292.1Glutamate-ammonia-ligase adenylyltransferase. (914 aa)    
Predicted Functional Partners:
SFR36285.1
Triphosphatase.
      0.914
SFR50757.1
L-glutamine synthetase.
 
   
 0.802
SFR41339.1
UTP--GlnB (protein PII) uridylyltransferase, GlnD.
 
   
 0.790
SFR44166.1
acyl-CoA thioester hydrolase.
 
    0.563
SFR39473.1
ATP-dependent helicase HrpA.
  
     0.546
SFR36272.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
       0.499
SFR45862.1
HPt (histidine-containing phosphotransfer) domain-containing protein; Manually curated.
     
 0.486
SFR57667.1
NAD+ synthase (glutamine-hydrolysing).
     
 0.480
SFR36832.1
Chorismate mutase.
      
 0.432
SFR37345.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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