STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR37386.1Aspartyl protease. (297 aa)    
Predicted Functional Partners:
SFR37395.1
CubicO group peptidase, beta-lactamase class C family.
       0.705
SFR43031.1
Lipoprotein NlpI.
    
 
 0.676
SFR37377.1
Hypothetical protein.
       0.605
SFR37302.1
Protein of unknown function.
   
  0.539
SFR47016.1
Hypothetical protein.
   
  0.539
SFR49413.1
Protein of unknown function.
   
  0.539
SFR49648.1
Calx-beta domain-containing protein.
   
  0.539
SFR50687.1
ELWxxDGT repeat-containing protein.
   
  0.539
SFR37404.1
Thermostable hemolysin.
       0.443
SFR37417.1
Long-chain acyl-CoA synthetase (AMP-forming).
       0.443
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.