STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (248 aa)    
Predicted Functional Partners:
SFR46491.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
  
 0.974
SFR36140.1
XTP/dITP diphosphohydrolase.
 
 
  0.913
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.852
glsA
L-glutaminase; Belongs to the glutaminase family.
     
 0.799
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
  
 0.790
SFR37427.1
Pyrroloquinoline quinone (PQQ) biosynthesis protein C.
       0.773
SFR37436.1
Short-chain dehydrogenase.
       0.773
SFR37446.1
Hypothetical protein.
       0.773
SFR37453.1
Two-component system, OmpR family, response regulator.
       0.773
SFR37462.1
Two-component system, OmpR family, sensor histidine kinase QseC.
       0.773
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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