STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR38254.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
SFR38264.1
Hypothetical protein.
       0.832
SFR38276.1
UPF0271 protein; Manually curated.
       0.832
SFR38243.1
Hypothetical protein.
       0.781
SFR38287.1
Sensor histidine kinase inhibitor, KipI family.
       0.741
SFR38298.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
       0.741
SFR38218.1
Hypothetical protein.
       0.635
glnS
glutaminyl-tRNA synthetase.
       0.584
SFR38230.1
Hypothetical protein.
       0.533
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.