Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR36357.1 | SFR38359.1 | SAMN04488070_0051 | SAMN04488070_0280 | Hypothetical protein. | Negative regulator of replication initiation SeqA. | 0.764 |
SFR36357.1 | SFR38481.1 | SAMN04488070_0051 | SAMN04488070_0293 | Hypothetical protein. | Outer membrane protein assembly factor BamC. | 0.774 |
SFR36357.1 | SFR38530.1 | SAMN04488070_0051 | SAMN04488070_0299 | Hypothetical protein. | Hypothetical protein. | 0.775 |
SFR36357.1 | SFR39881.1 | SAMN04488070_0051 | SAMN04488070_0475 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFR36357.1 | SFR40242.1 | SAMN04488070_0051 | SAMN04488070_0523 | Hypothetical protein. | ProP effector. | 0.774 |
SFR36357.1 | SFR41406.1 | SAMN04488070_0051 | SAMN04488070_0688 | Hypothetical protein. | SecY interacting protein Syd. | 0.766 |
SFR36357.1 | SFR43031.1 | SAMN04488070_0051 | SAMN04488070_0904 | Hypothetical protein. | Lipoprotein NlpI. | 0.775 |
SFR36357.1 | SFR46804.1 | SAMN04488070_0051 | SAMN04488070_1339 | Hypothetical protein. | Lipopolysaccharide export system protein LptC. | 0.771 |
SFR36357.1 | SFR51125.1 | SAMN04488070_0051 | SAMN04488070_1640 | Hypothetical protein. | Methionine repressor, MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis. | 0.774 |
SFR36357.1 | SFR55229.1 | SAMN04488070_0051 | SAMN04488070_1911 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFR38359.1 | SFR36357.1 | SAMN04488070_0280 | SAMN04488070_0051 | Negative regulator of replication initiation SeqA. | Hypothetical protein. | 0.764 |
SFR38359.1 | SFR38481.1 | SAMN04488070_0280 | SAMN04488070_0293 | Negative regulator of replication initiation SeqA. | Outer membrane protein assembly factor BamC. | 0.769 |
SFR38359.1 | SFR38530.1 | SAMN04488070_0280 | SAMN04488070_0299 | Negative regulator of replication initiation SeqA. | Hypothetical protein. | 0.758 |
SFR38359.1 | SFR39881.1 | SAMN04488070_0280 | SAMN04488070_0475 | Negative regulator of replication initiation SeqA. | Hypothetical protein. | 0.725 |
SFR38359.1 | SFR40242.1 | SAMN04488070_0280 | SAMN04488070_0523 | Negative regulator of replication initiation SeqA. | ProP effector. | 0.730 |
SFR38359.1 | SFR41406.1 | SAMN04488070_0280 | SAMN04488070_0688 | Negative regulator of replication initiation SeqA. | SecY interacting protein Syd. | 0.690 |
SFR38359.1 | SFR43031.1 | SAMN04488070_0280 | SAMN04488070_0904 | Negative regulator of replication initiation SeqA. | Lipoprotein NlpI. | 0.766 |
SFR38359.1 | SFR46804.1 | SAMN04488070_0280 | SAMN04488070_1339 | Negative regulator of replication initiation SeqA. | Lipopolysaccharide export system protein LptC. | 0.710 |
SFR38359.1 | SFR51125.1 | SAMN04488070_0280 | SAMN04488070_1640 | Negative regulator of replication initiation SeqA. | Methionine repressor, MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis. | 0.765 |
SFR38359.1 | SFR55229.1 | SAMN04488070_0280 | SAMN04488070_1911 | Negative regulator of replication initiation SeqA. | Hypothetical protein. | 0.770 |
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