Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR40545.1 | SFR40552.1 | SAMN04488070_0567 | SAMN04488070_0568 | FAD/FMN-containing dehydrogenase. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.982 |
SFR40545.1 | SFR40558.1 | SAMN04488070_0567 | SAMN04488070_0569 | FAD/FMN-containing dehydrogenase. | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | 0.733 |
SFR40545.1 | SFR46786.1 | SAMN04488070_0567 | SAMN04488070_1337 | FAD/FMN-containing dehydrogenase. | Arabinose-5-phosphate isomerase. | 0.413 |
SFR40552.1 | SFR40545.1 | SAMN04488070_0568 | SAMN04488070_0567 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | FAD/FMN-containing dehydrogenase. | 0.982 |
SFR40552.1 | SFR40558.1 | SAMN04488070_0568 | SAMN04488070_0569 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | 0.961 |
SFR40558.1 | SFR40545.1 | SAMN04488070_0569 | SAMN04488070_0567 | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | FAD/FMN-containing dehydrogenase. | 0.733 |
SFR40558.1 | SFR40552.1 | SAMN04488070_0569 | SAMN04488070_0568 | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.961 |
SFR40558.1 | SFR44543.1 | SAMN04488070_0569 | SAMN04488070_1095 | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | CBS domain-containing protein. | 0.683 |
SFR40558.1 | SFR46786.1 | SAMN04488070_0569 | SAMN04488070_1337 | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | Arabinose-5-phosphate isomerase. | 0.700 |
SFR40558.1 | rsgA | SAMN04488070_0569 | SAMN04488070_1421 | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.405 |
SFR44543.1 | SFR40558.1 | SAMN04488070_1095 | SAMN04488070_0569 | CBS domain-containing protein. | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | 0.683 |
SFR44543.1 | SFR46786.1 | SAMN04488070_1095 | SAMN04488070_1337 | CBS domain-containing protein. | Arabinose-5-phosphate isomerase. | 0.799 |
SFR46786.1 | SFR40545.1 | SAMN04488070_1337 | SAMN04488070_0567 | Arabinose-5-phosphate isomerase. | FAD/FMN-containing dehydrogenase. | 0.413 |
SFR46786.1 | SFR40558.1 | SAMN04488070_1337 | SAMN04488070_0569 | Arabinose-5-phosphate isomerase. | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | 0.700 |
SFR46786.1 | SFR44543.1 | SAMN04488070_1337 | SAMN04488070_1095 | Arabinose-5-phosphate isomerase. | CBS domain-containing protein. | 0.799 |
rsgA | SFR40558.1 | SAMN04488070_1421 | SAMN04488070_0569 | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. | 0.405 |