STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR40627.1Nitroreductase. (183 aa)    
Predicted Functional Partners:
SFR43870.1
Cysteine sulfinate desulfinase/cysteine desulfurase.
  
 
 0.849
SFR58863.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.839
SFR35986.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
    0.822
SFR56661.1
Ribosome-dependent ATPase.
  
  
 0.820
SFR42235.1
Long-chain acyl-CoA synthetase.
 
 
   0.797
SFR41998.1
Lactoylglutathione lyase.
  
  
 0.745
SFR36635.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 
 0.718
SFR39103.1
feruloyl-CoA synthase.
   
   0.712
SFR49820.1
fatty-acyl-CoA synthase.
   
   0.712
SFR58626.1
fatty-acyl-CoA synthase.
   
   0.712
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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