STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR42251.1Outer membrane lipoprotein. (190 aa)    
Predicted Functional Partners:
SFR42243.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.836
SFR42258.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
    0.741
SFR42266.1
ATP-dependent DNA helicase DinG.
       0.734
SFR42235.1
Long-chain acyl-CoA synthetase.
       0.719
SFR42226.1
Ribonuclease D.
       0.664
SFR42908.1
LPS-assembly lipoprotein.
  
     0.596
SFR42212.1
Membrane-bound lytic murein transglycosylase B.
       0.584
SFR42219.1
Hypothetical protein.
       0.584
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.573
smg
Smg protein; Belongs to the Smg family.
  
     0.568
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.