STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR43311.1Secreted Zn-dependent peptidases, insulinase-like. (910 aa)    
Predicted Functional Partners:
SFR43302.1
Beta-barrel assembly machine subunit BamE.
       0.752
SFR43318.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
       0.593
SFR54049.1
Hypothetical protein.
  
     0.591
SFR42580.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase.
    
 
 0.578
SFR56305.1
MioC protein.
   
 
  0.525
SFR43294.1
DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.506
SFR49266.1
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA.
    
  0.455
SFR46987.1
MSHA pilin protein MshD.
  
     0.448
SFR41770.1
Indole-3-glycerol phosphate synthase.
      
 0.446
SFR46997.1
MSHA biogenesis protein MshO.
  
     0.421
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.