STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR43976.1iron(III) transport system substrate-binding protein. (342 aa)    
Predicted Functional Partners:
SFR43984.1
iron(III) transport system permease protein.
 
 
 0.997
SFR43994.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.990
SFR57886.1
High-affinity iron transporter.
   
    0.808
SFR45862.1
HPt (histidine-containing phosphotransfer) domain-containing protein; Manually curated.
    
 0.687
SFR53320.1
Chemotaxis protein MotB.
    
   0.681
SFR56011.1
Flagellar FliL protein.
    
   0.681
SFR60831.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
  
  
 0.643
SFR39944.1
Thioredoxin reductase (NADPH).
   
    0.602
SFR55784.1
Chemotaxis protein MotB.
    
   0.575
SFR56661.1
Ribosome-dependent ATPase.
    
 0.574
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.