Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR46445.1 | SFR46472.1 | SAMN04488070_1298 | SAMN04488070_1301 | Cell division protein FtsQ. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | 0.990 |
SFR46445.1 | SFR46481.1 | SAMN04488070_1298 | SAMN04488070_1302 | Cell division protein FtsQ. | Cell division-specific peptidoglycan biosynthesis regulator FtsW. | 0.995 |
SFR46445.1 | SFR46491.1 | SAMN04488070_1298 | SAMN04488070_1303 | Cell division protein FtsQ. | UDP-N-acetylmuramoylalanine--D-glutamate ligase. | 0.980 |
SFR46445.1 | SFR46509.1 | SAMN04488070_1298 | SAMN04488070_1305 | Cell division protein FtsQ. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase. | 0.955 |
SFR46445.1 | SFR54272.1 | SAMN04488070_1298 | SAMN04488070_1829 | Cell division protein FtsQ. | Alanine racemase. | 0.572 |
SFR46445.1 | ddl | SAMN04488070_1298 | SAMN04488070_1299 | Cell division protein FtsQ. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.985 |
SFR46445.1 | ftsI | SAMN04488070_1298 | SAMN04488070_1307 | Cell division protein FtsQ. | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.989 |
SFR46445.1 | mraY | SAMN04488070_1298 | SAMN04488070_1304 | Cell division protein FtsQ. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.922 |
SFR46445.1 | murC | SAMN04488070_1298 | SAMN04488070_1300 | Cell division protein FtsQ. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.980 |
SFR46445.1 | murE | SAMN04488070_1298 | SAMN04488070_1306 | Cell division protein FtsQ. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.927 |
SFR46472.1 | SFR46445.1 | SAMN04488070_1301 | SAMN04488070_1298 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | Cell division protein FtsQ. | 0.990 |
SFR46472.1 | SFR46481.1 | SAMN04488070_1301 | SAMN04488070_1302 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | Cell division-specific peptidoglycan biosynthesis regulator FtsW. | 0.997 |
SFR46472.1 | SFR46491.1 | SAMN04488070_1301 | SAMN04488070_1303 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | UDP-N-acetylmuramoylalanine--D-glutamate ligase. | 0.999 |
SFR46472.1 | SFR46509.1 | SAMN04488070_1301 | SAMN04488070_1305 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase. | 0.993 |
SFR46472.1 | SFR54272.1 | SAMN04488070_1301 | SAMN04488070_1829 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | Alanine racemase. | 0.573 |
SFR46472.1 | ddl | SAMN04488070_1301 | SAMN04488070_1299 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.991 |
SFR46472.1 | ftsI | SAMN04488070_1301 | SAMN04488070_1307 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.977 |
SFR46472.1 | mraY | SAMN04488070_1301 | SAMN04488070_1304 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.995 |
SFR46472.1 | murC | SAMN04488070_1301 | SAMN04488070_1300 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.999 |
SFR46472.1 | murE | SAMN04488070_1301 | SAMN04488070_1306 | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.991 |
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