Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR43517.1 | SFR47036.1 | SAMN04488070_0970 | SAMN04488070_1364 | General secretion pathway protein E. | MSHA pilin protein MshB. | 0.533 |
SFR43517.1 | SFR47044.1 | SAMN04488070_0970 | SAMN04488070_1365 | General secretion pathway protein E. | MSHA biogenesis protein MshG. | 0.926 |
SFR43517.1 | SFR47112.1 | SAMN04488070_0970 | SAMN04488070_1372 | General secretion pathway protein E. | Hypothetical protein. | 0.605 |
SFR43517.1 | SFR47119.1 | SAMN04488070_0970 | SAMN04488070_1373 | General secretion pathway protein E. | MSHA biogenesis protein MshI. | 0.440 |
SFR45319.1 | SFR47036.1 | SAMN04488070_1177 | SAMN04488070_1364 | Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | MSHA pilin protein MshB. | 0.533 |
SFR45319.1 | SFR47044.1 | SAMN04488070_1177 | SAMN04488070_1365 | Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | MSHA biogenesis protein MshG. | 0.926 |
SFR45319.1 | SFR47112.1 | SAMN04488070_1177 | SAMN04488070_1372 | Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Hypothetical protein. | 0.605 |
SFR45319.1 | SFR47119.1 | SAMN04488070_1177 | SAMN04488070_1373 | Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | MSHA biogenesis protein MshI. | 0.440 |
SFR46340.1 | SFR47036.1 | SAMN04488070_1286 | SAMN04488070_1364 | Type IV pilus assembly protein PilB. | MSHA pilin protein MshB. | 0.533 |
SFR46340.1 | SFR47044.1 | SAMN04488070_1286 | SAMN04488070_1365 | Type IV pilus assembly protein PilB. | MSHA biogenesis protein MshG. | 0.926 |
SFR46340.1 | SFR47112.1 | SAMN04488070_1286 | SAMN04488070_1372 | Type IV pilus assembly protein PilB. | Hypothetical protein. | 0.605 |
SFR46340.1 | SFR47119.1 | SAMN04488070_1286 | SAMN04488070_1373 | Type IV pilus assembly protein PilB. | MSHA biogenesis protein MshI. | 0.440 |
SFR47036.1 | SFR43517.1 | SAMN04488070_1364 | SAMN04488070_0970 | MSHA pilin protein MshB. | General secretion pathway protein E. | 0.533 |
SFR47036.1 | SFR45319.1 | SAMN04488070_1364 | SAMN04488070_1177 | MSHA pilin protein MshB. | Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.533 |
SFR47036.1 | SFR46340.1 | SAMN04488070_1364 | SAMN04488070_1286 | MSHA pilin protein MshB. | Type IV pilus assembly protein PilB. | 0.533 |
SFR47036.1 | SFR47044.1 | SAMN04488070_1364 | SAMN04488070_1365 | MSHA pilin protein MshB. | MSHA biogenesis protein MshG. | 0.921 |
SFR47036.1 | SFR47054.1 | SAMN04488070_1364 | SAMN04488070_1366 | MSHA pilin protein MshB. | MSHA biogenesis protein MshE. | 0.924 |
SFR47036.1 | SFR47074.1 | SAMN04488070_1364 | SAMN04488070_1368 | MSHA pilin protein MshB. | MSHA biogenesis protein MshM. | 0.902 |
SFR47036.1 | SFR47083.1 | SAMN04488070_1364 | SAMN04488070_1369 | MSHA pilin protein MshB. | MSHA biogenesis protein MshL. | 0.924 |
SFR47036.1 | SFR47102.1 | SAMN04488070_1364 | SAMN04488070_1371 | MSHA pilin protein MshB. | Hypothetical protein. | 0.924 |
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