STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR49435.12OG-Fe(II) oxygenase superfamily protein. (231 aa)    
Predicted Functional Partners:
SFR54644.1
Catecholate siderophore receptor.
  
  
 0.780
SFR49429.1
Uncharacterized conserved protein YeaO, DUF488 family.
       0.773
SFR49010.1
Protein of unknown function.
  
     0.747
SFR40774.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
     0.645
SFR57748.1
Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family.
  
     0.581
SFR36486.1
Putative adhesin.
  
     0.577
SFR38359.1
Negative regulator of replication initiation SeqA.
  
     0.565
SFR53383.1
Succinylglutamate desuccinylase / Aspartoacylase family protein.
  
     0.562
SFR41397.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.554
SFR59084.1
Aminopeptidase N.
  
     0.552
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.