STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR53362.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
SFR53350.1
Hypothetical protein.
       0.773
SFR53372.1
Uncharacterized membrane protein YhaH, DUF805 family.
       0.773
SFR41860.1
Methyltransferase domain-containing protein.
 
      0.721
SFR53340.1
Potassium and/or sodium efflux P-type ATPase.
       0.705
SFR53383.1
Succinylglutamate desuccinylase / Aspartoacylase family protein.
       0.523
SFR53330.1
Chemotaxis protein MotA.
  
    0.519
SFR53320.1
Chemotaxis protein MotB.
       0.517
SFR53391.1
Uncharacterized conserved protein, MAPEG superfamily.
       0.482
SFR41785.1
Tryptophan synthase, alpha chain.
    
  0.421
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.