STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR53402.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
SFR50926.1
Thioesterase domain-containing protein, putative.
  
     0.727
SFR51125.1
Methionine repressor, MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis.
  
     0.724
SFR38481.1
Outer membrane protein assembly factor BamC.
  
     0.712
SFR38530.1
Hypothetical protein.
  
     0.701
SFR46922.1
TIGR02099 family protein.
  
     0.685
SFR55229.1
Hypothetical protein.
  
     0.677
SFR41406.1
SecY interacting protein Syd.
  
     0.671
SFR49116.1
Hypothetical protein.
  
     0.668
SFR36357.1
Hypothetical protein.
  
     0.649
SFR46698.1
Hypothetical protein.
  
     0.639
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.