STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR56219.1Anti-sigma-28 factor, FlgM family. (90 aa)    
Predicted Functional Partners:
SFR55727.1
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family.
  
 0.993
SFR55865.1
Flagellar protein FliS.
  
 
 0.991
SFR56230.1
Flagella synthesis protein FlgN.
  
  
 0.988
SFR56208.1
Flagella basal body P-ring formation protein FlgA.
  
  
 0.935
SFR56166.1
Flagellar hook protein FlgE.
  
 
 0.934
SFR56098.1
Flagellar hook-associated protein 1 FlgK.
  
  
 0.932
SFR56198.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.930
SFR56176.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
  
  
 0.924
SFR56186.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.924
SFR55875.1
Flagellar hook-associated protein 2.
  
  
 0.910
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.