STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR56875.1Cytochrome c oxidase accessory protein FixG. (473 aa)    
Predicted Functional Partners:
SFR40446.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.994
SFR40433.1
Cytochrome c oxidase cbb3-type subunit 2.
 
  
 0.986
SFR40428.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.973
SFR56885.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
       0.807
SFR40470.1
Hypothetical protein.
 
     0.776
SFR49131.1
Dissimilatory nitrite reductase (NO-forming), cytochrome cd1 type apoprotein.
  
  
 0.771
SFR60929.1
Cytochrome c, mono-and diheme variants.
  
  
 0.771
SFR56896.1
Thiol:disulfide interchange protein DsbA.
  
    0.768
SFR51514.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.748
SFR40440.1
Cytochrome c oxidase cbb3-type subunit 4.
 
  
 0.675
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
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