STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR58053.1Amidohydrolase family protein. (526 aa)    
Predicted Functional Partners:
SFR43682.1
Protein of unknown function.
  
     0.769
SFR58063.1
5-formyltetrahydrofolate cyclo-ligase.
       0.695
SFR53811.1
Zinc carboxypeptidase.
 
     0.684
SFR57852.1
Carboxypeptidase C (cathepsin A).
  
     0.675
SFR58887.1
Carboxypeptidase C (cathepsin A).
  
     0.634
SFR39683.1
Zinc carboxypeptidase.
 
     0.613
SFR37517.1
Phosphohistidine phosphatase SixA.
  
     0.608
SFR39293.1
Uncharacterized conserved protein YbgA, DUF1722 family.
    
  0.580
SFR60939.1
Purine-nucleoside phosphorylase.
   
 
  0.580
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
    
 0.578
Your Current Organism:
Idiomarina maritima
NCBI taxonomy Id: 519453
Other names: CGMCC 1.7285, I. maritima, Idiomarina maritima (Wu et al. 2009) Taborda et al. 2010, JCM 15534, Pseudidiomarina maritima, Pseudidiomarina maritima Wu et al. 2009, Pseudidiomarina sp. 908087, strain 908087
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.