node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR39571.1 | rplD | SAMN04488070_0435 | SAMN04488070_0078 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.997 |
SFR39571.1 | rpsB | SAMN04488070_0435 | SAMN04488070_0678 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.995 |
SFR39571.1 | rpsC | SAMN04488070_0435 | SAMN04488070_0083 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.990 |
SFR39571.1 | rpsF | SAMN04488070_0435 | SAMN04488070_0063 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.973 |
SFR39571.1 | rpsJ | SAMN04488070_0435 | SAMN04488070_0076 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.992 |
SFR39571.1 | rpsK | SAMN04488070_0435 | SAMN04488070_2273 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
SFR39571.1 | rpsO | SAMN04488070_0435 | SAMN04488070_0906 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.979 |
SFR39571.1 | rpsP | SAMN04488070_0435 | SAMN04488070_0113 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.990 |
SFR39571.1 | rpsQ | SAMN04488070_0435 | SAMN04488070_0086 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.994 |
SFR39571.1 | rpsS | SAMN04488070_0435 | SAMN04488070_0081 | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.983 |
rplD | SFR39571.1 | SAMN04488070_0078 | SAMN04488070_0435 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.997 |
rplD | rpsB | SAMN04488070_0078 | SAMN04488070_0678 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplD | rpsC | SAMN04488070_0078 | SAMN04488070_0083 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplD | rpsF | SAMN04488070_0078 | SAMN04488070_0063 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.995 |
rplD | rpsJ | SAMN04488070_0078 | SAMN04488070_0076 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rplD | rpsK | SAMN04488070_0078 | SAMN04488070_2273 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplD | rpsO | SAMN04488070_0078 | SAMN04488070_0906 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |
rplD | rpsP | SAMN04488070_0078 | SAMN04488070_0113 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.995 |
rplD | rpsQ | SAMN04488070_0078 | SAMN04488070_0086 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
rplD | rpsS | SAMN04488070_0078 | SAMN04488070_0081 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |