Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHQ51142.1Phage SPO1 DNA polymerase-like protein; COG1573 Uracil-DNA glycosylase. (198 aa)    
Predicted Functional Partners:
EHQ51143.1
Acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
  
    0.857
EHQ53080.1
Hypothetical protein; COG1573 Uracil-DNA glycosylase.
  
  
0.838
EHQ51646.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
 
 0.681
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
 
     0.661
EHQ52154.1
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.624
EHQ53088.1
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
  
    0.621
EHQ51144.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
    0.615
EHQ51301.1
Peptidase M23; COG4942 Membrane-bound metallopeptidase.
   
   0.593
EHQ51744.1
Peptidase M22 glycoprotease; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
  
    0.572
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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