Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ51204.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
EHQ51609.1
Hypothetical protein.
  
     0.760
EHQ51203.1
Hypothetical protein; COG0675 Transposase and inactivated derivatives.
 
     0.713
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.671
EHQ52029.1
Hypothetical protein.
  
     0.636
EHQ51202.1
Transposon resolvase.
       0.608
EHQ51886.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.580
EHQ52160.1
FlgN family protein; COG3418 Flagellar biosynthesis/type III secretory pathway chaperone.
  
     0.572
EHQ53004.1
Hypothetical protein.
 
     0.554
EHQ51201.1
Transposon resolvase; COG2452 Predicted site-specific integrase-resolvase.
       0.548
EHQ51800.1
CheW protein; COG0835 Chemotaxis signal transduction protein.
  
     0.547
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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