Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHQ51237.1Diguanylate cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. (331 aa)    
Predicted Functional Partners:
EHQ53756.1
COG0642 Signal transduction histidine kinase.
 
 0.888
EHQ51253.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 0.881
EHQ51915.1
Multi-sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 0.872
EHQ51155.1
Multi-sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 0.868
EHQ52283.1
Diguanylate phosphodiesterase; COG2200 FOG: EAL domain.
 
 
  0.842
EHQ51238.1
COG5012 Predicted cobalamin binding protein.
 
     0.810
EHQ51718.1
Response regulator receiver modulated metal dependent phosphohydrolase; COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 
    0.760
EHQ51326.1
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain.
 
0.731
EHQ53720.1
Hypothetical protein; COG2200 FOG: EAL domain.
  
 
  0.731
EHQ52641.1
EAL and GGDEF domain-containing protein; COG2199 FOG: GGDEF domain.
 
0.726
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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