Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EHQ51831.1COG4067 Uncharacterized protein conserved in archaea. (204 aa)    
Predicted Functional Partners:
EHQ51832.1
Hypothetical protein.
 
     0.939
EHQ51833.1
alpha-L-glutamate ligase-like protein.
 
     0.938
EHQ51830.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.651
EHQ52925.1
Small-conductance mechanosensitive channel-like protein; COG1196 Chromosome segregation ATPases.
 
    0.480
EHQ51829.1
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
       0.455
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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