Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ52116.1Hypothetical protein. (314 aa)    
Predicted Functional Partners:
EHQ52115.1
Toxic anion resistance family protein; COG3853 Uncharacterized protein involved in tellurite resistance.
 
     0.922
EHQ52117.1
Hypothetical protein.
       0.586
EHQ52527.1
Hypothetical protein.
  
     0.556
EHQ52941.1
Putative GAF sensor protein; COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains.
  
     0.516
EHQ52114.1
Hypothetical protein.
       0.504
EHQ51687.1
Phasin family protein; COG0459 Chaperonin GroEL (HSP60 family).
  
     0.491
EHQ53371.1
Hypothetical protein.
  
     0.482
EHQ52678.1
Hypothetical protein.
  
     0.477
EHQ53430.1
Hypothetical protein.
  
     0.444
EHQ53004.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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