Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EHQ52492.1Spermidine export protein mdtJ; COG2076 Membrane transporters of cations and cationic drugs. (108 aa)    
Predicted Functional Partners:
EHQ52493.1
Spermidine export protein mdtI; COG2076 Membrane transporters of cations and cationic drugs.
 
     0.830
EHQ53019.1
Transporter; COG2076 Membrane transporters of cations and cationic drugs.
 
   
 0.620
EHQ52491.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.530
EHQ52494.1
Permease; COG3329 Predicted permease.
       0.459
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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