Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ52548.1COG3521 Uncharacterized protein conserved in bacteria. (169 aa)    
Predicted Functional Partners:
EHQ53321.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.967
EHQ52549.1
COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.959
EHQ53324.1
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.950
EHQ53318.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.947
EHQ53322.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.947
EHQ53319.1
COG3523 Uncharacterized protein conserved in bacteria.
 
  
 0.915
EHQ53326.1
Rhs element protein VgrE; COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.897
EHQ53317.1
COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.888
EHQ53320.1
COG3515 Uncharacterized protein conserved in bacteria.
 
  
 0.864
EHQ53323.1
COG3157 Hemolysin-coregulated protein (uncharacterized).
 
  
 0.864
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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