Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ52630.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
EHQ52631.1
Magnesium transporter; Acts as a magnesium transporter.
       0.757
EHQ52629.1
Na+/Pi-cotransporter; COG1283 Na+/phosphate symporter.
 
     0.634
EHQ53372.1
Hypothetical protein.
  
     0.564
EHQ52721.1
Membrane-flanked domain-containing protein.
  
     0.560
EHQ51888.1
Type II secretion system protein N.
  
     0.542
EHQ51615.1
Hypothetical protein.
  
     0.529
EHQ51382.1
Anti-sigma-factor antagonist; COG3113 Predicted NTP binding protein (contains STAS domain).
  
     0.503
EHQ52195.1
Hypothetical protein.
  
     0.424
EHQ51442.1
TPR repeat-containing protein; COG0457 FOG: TPR repeat.
  
     0.404
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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