EHQ52874.1 protein (Ectothiorhodospira sp. PHS1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

EHQ52874.1

Metal dependent phosphohydrolase; COG1639 Predicted signal transduction protein; overlaps another CDS with the same product name. (407 aa)

Predicted Functional Partners:

EHQ52873.1

0.797

EHQ51136.1

0.758

EHQ53416.1

0.729

EHQ51942.1

0.706

EHQ52266.1

0.687

EHQ52871.1

0.625

lipA

0.625

EHQ52875.1

0.610

EHQ52158.1

0.602

EHQ52153.1

0.576

Your Current Organism:

Ectothiorhodospira sp. PHS1

NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHQ51136.1	EHQ52153.1	ECTPHS_00505	ECTPHS_05646	COG1639 Predicted signal transduction protein.	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	0.497
EHQ51136.1	EHQ52158.1	ECTPHS_00505	ECTPHS_05671	COG1639 Predicted signal transduction protein.	Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.	0.421
EHQ51136.1	EHQ52873.1	ECTPHS_00505	ECTPHS_09283	COG1639 Predicted signal transduction protein.	Metal dependent phosphohydrolase; COG1639 Predicted signal transduction protein; overlaps another CDS with the same product name.	0.754
EHQ51136.1	EHQ52874.1	ECTPHS_00505	ECTPHS_09288	COG1639 Predicted signal transduction protein.	Metal dependent phosphohydrolase; COG1639 Predicted signal transduction protein; overlaps another CDS with the same product name.	0.758
EHQ51942.1	EHQ52153.1	ECTPHS_04573	ECTPHS_05646	Hypothetical protein; COG3144 Flagellar hook-length control protein.	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	0.937
EHQ51942.1	EHQ52158.1	ECTPHS_04573	ECTPHS_05671	Hypothetical protein; COG3144 Flagellar hook-length control protein.	Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.	0.846
EHQ51942.1	EHQ52266.1	ECTPHS_04573	ECTPHS_06217	Hypothetical protein; COG3144 Flagellar hook-length control protein.	Flagellar basal body-associated protein-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.	0.923
EHQ51942.1	EHQ52873.1	ECTPHS_04573	ECTPHS_09283	Hypothetical protein; COG3144 Flagellar hook-length control protein.	Metal dependent phosphohydrolase; COG1639 Predicted signal transduction protein; overlaps another CDS with the same product name.	0.693
EHQ51942.1	EHQ52874.1	ECTPHS_04573	ECTPHS_09288	Hypothetical protein; COG3144 Flagellar hook-length control protein.	Metal dependent phosphohydrolase; COG1639 Predicted signal transduction protein; overlaps another CDS with the same product name.	0.706
EHQ51942.1	EHQ53416.1	ECTPHS_04573	ECTPHS_12094	Hypothetical protein; COG3144 Flagellar hook-length control protein.	COG1639 Predicted signal transduction protein.	0.708
EHQ52153.1	EHQ51136.1	ECTPHS_05646	ECTPHS_00505	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	COG1639 Predicted signal transduction protein.	0.497
EHQ52153.1	EHQ51942.1	ECTPHS_05646	ECTPHS_04573	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	Hypothetical protein; COG3144 Flagellar hook-length control protein.	0.937
EHQ52153.1	EHQ52158.1	ECTPHS_05646	ECTPHS_05671	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.	0.993
EHQ52153.1	EHQ52266.1	ECTPHS_05646	ECTPHS_06217	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	Flagellar basal body-associated protein-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.	0.939
EHQ52153.1	EHQ52873.1	ECTPHS_05646	ECTPHS_09283	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	Metal dependent phosphohydrolase; COG1639 Predicted signal transduction protein; overlaps another CDS with the same product name.	0.572
EHQ52153.1	EHQ52874.1	ECTPHS_05646	ECTPHS_09288	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	Metal dependent phosphohydrolase; COG1639 Predicted signal transduction protein; overlaps another CDS with the same product name.	0.576
EHQ52158.1	EHQ51136.1	ECTPHS_05671	ECTPHS_00505	Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.	COG1639 Predicted signal transduction protein.	0.421
EHQ52158.1	EHQ51942.1	ECTPHS_05671	ECTPHS_04573	Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.	Hypothetical protein; COG3144 Flagellar hook-length control protein.	0.846
EHQ52158.1	EHQ52153.1	ECTPHS_05671	ECTPHS_05646	Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.	Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.	0.993
EHQ52158.1	EHQ52266.1	ECTPHS_05671	ECTPHS_06217	Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.	Flagellar basal body-associated protein-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.	0.961