Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ52973.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
EHQ52974.1
Hypothetical protein.
 
   0.995
EHQ53718.1
Hypothetical protein.
 
   0.968
EHQ52975.1
HAMP domain-containing protein 1; COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific.
 
    0.928
EHQ52972.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
  
   0.835
EHQ53719.1
Protein serine/threonine phosphatase; COG0517 FOG: CBS domain.
 
    0.822
EHQ52264.1
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
  
   0.819
EHQ52976.1
Diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
   0.660
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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