Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ53313.1Hypothetical protein. (918 aa)    
Predicted Functional Partners:
EHQ53312.1
Methyl-accepting chemotaxis protein.
 
     0.957
EHQ53311.1
COG1201 Lhr-like helicases.
 
     0.952
EHQ52616.1
COG0515 Serine/threonine protein kinase.
 
     0.799
EHQ53316.1
DNA methylase.
 
     0.799
EHQ52618.1
Hypothetical protein; COG1002 Type II restriction enzyme, methylase subunits.
 
     0.788
EHQ53766.1
Hypothetical protein.
  
     0.536
EHQ53360.1
Hypothetical protein; COG0470 ATPase involved in DNA replication.
  
     0.511
EHQ53310.1
Hypothetical protein.
       0.510
EHQ53309.1
TrkA-N domain-containing protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.478
EHQ53355.1
Alkaline phosphatase domain-containing protein.
  
     0.447
Your Current Organism:
Ectothiorhodospira sp. PHS1
NCBI taxonomy Id: 519989
Other names: E. sp. PHS-1, Ectothiorhodospira sp. PHS-1
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