STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT35910.1Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
cyaB
Cyclolysin secretion/processing ATP-binding protein CyaB.
  
  
 0.620
AKT42425.1
ABC transporter ATP-binding protein.
  
  
 0.620
AKT38665.1
Uncharacterized protein.
   
    0.604
AKT36281.1
Competence protein.
  
  
 0.477
AKT39657.1
Uncharacterized protein.
  
  
 0.440
AKT40171.1
Outer membrane efflux protein.
  
  
 0.440
AKT41347.1
Uncharacterized protein.
  
  
 0.440
AKT36693.1
Uncharacterized protein.
   
    0.430
AKT40020.1
Uncharacterized protein.
   
    0.430
AKT42426.1
ABC transporter ATP-binding protein.
  
  
 0.419
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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