Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT35966.1Uncharacterized protein. (608 aa)    
Predicted Functional Partners:
AKT43375.1
Uncharacterized protein.
  
     0.765
AKT37934.1
Uncharacterized protein.
  
     0.753
AKT36147.1
Outer membrane protein.
  
 
   0.750
AKT42155.1
Uncharacterized protein.
  
     0.729
AKT36496.1
Uncharacterized protein.
  
     0.725
AKT36056.1
Uncharacterized protein.
  
     0.717
AKT40711.1
Uncharacterized protein.
  
     0.711
AKT36546.1
Uncharacterized protein.
 
     0.709
AKT39755.1
Uncharacterized protein.
  
     0.708
AKT39374.1
Uncharacterized protein.
  
     0.705
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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