STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livFAmino acid ABC transporter ATPase. (252 aa)    
Predicted Functional Partners:
AKT36017.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
AKT36016.1
ABC transporter.
 
 
0.997
AKT36286.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
eutJ
Ethanolamine utilization protein EutJ.
 
 
 0.990
AKT41420.1
Uncharacterized protein.
 
  
 0.650
AKT36018.1
Uncharacterized protein.
       0.641
AKT41885.1
Uncharacterized protein.
  
  
 0.595
AKT37625.1
Uncharacterized protein.
  
  
 0.584
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
     
 0.567
AKT37629.1
Coenzyme F390 synthetase.
 
    0.555
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.