STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36100.1Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
AKT38677.1
Uncharacterized protein.
     
  0.900
AKT38836.1
Uncharacterized protein.
     
  0.900
AKT36099.1
Uncharacterized protein.
       0.786
AKT38765.1
ABC transporter.
 
    0.664
AKT41052.1
Fimbiral protein pilA.
  
     0.640
AKT43014.1
Uncharacterized protein.
  
    0.611
pilM
Pilus assembly protein PilM.
 
     0.609
AKT42302.1
Uncharacterized protein.
  
    0.606
AKT42812.1
Uncharacterized protein.
  
     0.605
AKT40723.1
Uncharacterized protein.
  
     0.595
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.