AKT36104.1 protein (Chondromyces crocatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AKT36104.1

Uncharacterized protein. (425 aa)

Predicted Functional Partners:

AKT37460.1

0.923

AKT36799.1

0.921

AKT40420.1

0.881

AKT40823.1

0.879

AKT40822.1

0.869

AKT40421.1

0.868

AKT36039.1

0.822

AKT43916.1

0.790

AKT40535.1

0.770

AKT40419.1

0.767

Your Current Organism:

Chondromyces crocatus

NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKT36039.1	AKT36104.1	CMC5_001510	CMC5_002170	Uncharacterized protein.	Uncharacterized protein.	0.822
AKT36039.1	AKT36799.1	CMC5_001510	CMC5_009200	Uncharacterized protein.	Histidine kinase.	0.995
AKT36039.1	AKT37460.1	CMC5_001510	CMC5_016010	Uncharacterized protein.	Diguanylate cyclase.	0.996
AKT36039.1	AKT40419.1	CMC5_001510	CMC5_045720	Uncharacterized protein.	Sulfate transporter.	0.587
AKT36039.1	AKT40420.1	CMC5_001510	CMC5_045730	Uncharacterized protein.	Uncharacterized protein.	0.813
AKT36039.1	AKT40421.1	CMC5_001510	CMC5_045740	Uncharacterized protein.	Uncharacterized protein.	0.813
AKT36039.1	AKT40535.1	CMC5_001510	CMC5_046900	Uncharacterized protein.	Uncharacterized protein.	0.991
AKT36039.1	AKT40822.1	CMC5_001510	CMC5_049770	Uncharacterized protein.	Uncharacterized protein.	0.702
AKT36039.1	AKT40823.1	CMC5_001510	CMC5_049780	Uncharacterized protein.	Protein kinase.	0.813
AKT36039.1	AKT43916.1	CMC5_001510	CMC5_081530	Uncharacterized protein.	Two-component hybrid sensor and regulator.	0.996
AKT36104.1	AKT36039.1	CMC5_002170	CMC5_001510	Uncharacterized protein.	Uncharacterized protein.	0.822
AKT36104.1	AKT36799.1	CMC5_002170	CMC5_009200	Uncharacterized protein.	Histidine kinase.	0.921
AKT36104.1	AKT37460.1	CMC5_002170	CMC5_016010	Uncharacterized protein.	Diguanylate cyclase.	0.923
AKT36104.1	AKT40419.1	CMC5_002170	CMC5_045720	Uncharacterized protein.	Sulfate transporter.	0.767
AKT36104.1	AKT40420.1	CMC5_002170	CMC5_045730	Uncharacterized protein.	Uncharacterized protein.	0.881
AKT36104.1	AKT40421.1	CMC5_002170	CMC5_045740	Uncharacterized protein.	Uncharacterized protein.	0.868
AKT36104.1	AKT40535.1	CMC5_002170	CMC5_046900	Uncharacterized protein.	Uncharacterized protein.	0.770
AKT36104.1	AKT40822.1	CMC5_002170	CMC5_049770	Uncharacterized protein.	Uncharacterized protein.	0.869
AKT36104.1	AKT40823.1	CMC5_002170	CMC5_049780	Uncharacterized protein.	Protein kinase.	0.879
AKT36104.1	AKT43916.1	CMC5_002170	CMC5_081530	Uncharacterized protein.	Two-component hybrid sensor and regulator.	0.790