STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36225.1Uncharacterized protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (321 aa)    
Predicted Functional Partners:
pilC
Pilus biosynthesis protein PilC.
 
  
 0.889
gspF
General secretion pathway protein GspF.
 
  
 0.888
AKT41693.1
Type II secretion system protein E.
 
 
 0.879
AKT36717.1
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.870
AKT40321.1
Uncharacterized protein.
 
 
 0.861
pilT
Twitching motility protein PilT.
 
   
 0.822
pilM
Pilus assembly protein PilM.
 
  
 0.821
AKT39790.1
Uncharacterized protein.
 
 
 0.818
AKT39216.1
Uncharacterized protein.
 
   
 0.815
pilT-2
Twitching motility protein PilT.
 
   
 0.814
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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