STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36231.13-isopropylmalate dehydratase. (660 aa)    
Predicted Functional Partners:
leuB
3-isopropylmalate dehydrogenase.
 0.999
leuA
2-isopropylmalate synthase.
 
 0.998
AKT44176.1
Uncharacterized protein.
 
  
  0.964
AKT40949.1
3-isopropylmalate dehydratase large subunit.
 
0.963
mvaB
hydroxymethylglutaryl-CoA lyase.
  
  
 0.957
AKT42219.1
Uncharacterized protein; Belongs to the TPP enzyme family.
 
  
 0.951
thrC
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
  
  
 0.949
ilvH
Acetolactate synthase; Belongs to the TPP enzyme family.
 
  
 0.936
maeB
Malic enzyme.
  
 
 0.890
AKT36026.1
Acetyltransferase.
  
  
 0.867
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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