STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kynATryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (370 aa)    
Predicted Functional Partners:
AKT40188.1
Kynureninase.
 
  
  0.949
AKT38816.1
Amino acid decarboxylase.
     
  0.900
AKT36250.1
Uncharacterized protein.
 
     0.799
AKT36249.1
Uncharacterized protein.
 
     0.778
hppD
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.631
hmgA
Homogentisate 1,2-dioxygenase.
 
  
 0.565
AKT36248.1
Serine protease.
  
    0.549
AKT36252.1
Uncharacterized protein.
       0.531
AKT36253.1
Uncharacterized protein.
       0.531
AKT39514.1
salicylyl-CoA 5-hydroxylase.
 
  
 0.518
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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