Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eutJEthanolamine utilization protein EutJ. (401 aa)    
Predicted Functional Partners:
AKT36286.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
AKT36017.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.996
AKT36016.1
ABC transporter.
 
 
 0.994
livF
Amino acid ABC transporter ATPase.
 
 
 0.992
AKT41420.1
Uncharacterized protein.
     
  0.900
AKT41885.1
Uncharacterized protein.
     
  0.900
AKT36287.1
Uncharacterized protein.
       0.610
AKT36283.1
Periplasmic substrate-binding protein.
     
 0.529
AKT36282.1
Peptidase.
       0.507
AKT36284.1
Hemolysin.
       0.507
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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