STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36294.1Isopenicillin N-epimerase. (397 aa)    
Predicted Functional Partners:
iscU
Fe-S cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 
 0.947
AKT38665.1
Uncharacterized protein.
   
    0.578
AKT36293.1
Uncharacterized protein.
     
 0.474
grxA-3
Glutaredoxin.
  
 
 0.470
cmdD
Uncharacterized protein; Involved in the synthesis of chondramides. Activates R-beta- tyrosine and probably phenylalanine.
  
  
 0.438
AKT36295.1
Cytochrome C peroxidase.
       0.412
AKT40027.1
Peptide synthetase.
  
  
 0.412
ajuL
Uncharacterized protein.
  
 
 0.409
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.