STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leuB3-isopropylmalate dehydrogenase. (362 aa)    
Predicted Functional Partners:
AKT36231.1
3-isopropylmalate dehydratase.
 0.999
AKT42219.1
Uncharacterized protein; Belongs to the TPP enzyme family.
 0.984
ilvH
Acetolactate synthase; Belongs to the TPP enzyme family.
 0.979
AKT40949.1
3-isopropylmalate dehydratase large subunit.
 
 0.975
leuA
2-isopropylmalate synthase.
 
 0.958
AKT39030.1
Serine/threonine dehydratase.
 
 
 0.953
mvaB
hydroxymethylglutaryl-CoA lyase.
  
 
 0.832
aceK
Isocitrate dehydrogenase.
 
 
0.817
ald
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
     
 0.753
hom
Homoserine dehydrogenase.
 
  
 0.725
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.